Chapter 11: Problem 4
Describe the role of \(^{15} \mathrm{N}\) in the Meselson-Stahl experiment.
Chapter 11: Problem 4
Describe the role of \(^{15} \mathrm{N}\) in the Meselson-Stahl experiment.
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Get started for freeSeveral temperature-sensitive mutant strains of \(E .\) coli display the following characteristics. Predict what enzyme or function is being affected by each mutation. (a) Newly synthesized DNA contains many mismatched base pairs. (b) Okazaki fragments accumulate, and DNA synthesis is never completed. (c) No initiation occurs. (d) Synthesis is very slow. (e) Supercoiled strands remain after replication, which is never completed.
During replication, what would be the consequences of the loss of functions of (a) single-stranded binding proteins, (b) DNA ligases, (c) DNA topoisomerases, and (d) DNA helicases?
Prokaryotic Okazaki fragments are in the range of 1200 nucleotides, while eukaryotic fragments are much shorter, more in the range of \(100-150\) nucleotides. Balakrishnan and Bambara (2013) suggest that the shorter length of Okazaki fragments is determined by nucleosome periodicity. Design an experiment to determine whether or not the length of Okazaki fragments in eukaryotes is dependent on nucleosomes being present on \(\mathrm{J}\)
What are the replication origins in bacteria, yeast, and mammalian cells?
DNA polymerases in all organisms add only \(5^{\prime}\) nucleotides to the \(3^{\prime}\) end of a growing DNA strand, never to the \(5^{\prime}\) end. One possible reason for this is the fact that most DNA polymerases have a proofreading function that would not be energetically possible if DNA synthesis occurred in the \(3^{\prime}\) to \(5^{\prime}\) direction. (a) Sketch the reaction that DNA polymerase would have to catalyze if DNA synthesis occurred in the \(3^{\prime}\) to \(5^{\prime}\) direction. (b) Consider the information in your sketch and speculate as to why proofreading would be problematic.
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