An enzyme-substrate complex can form when the substrate \((\mathrm{s})\) bind (s) to the active site of the enzyme. Which environmental condition might alter the conformation of an enzyme to the extent that its substrate is unable to bind? a. Enzyme \(A\) at \(40^{\circ} \mathrm{C}\) b. Enzyme \(B\) at pH 2 c. Enzyme \(X\) at \(p H 4\) d. Enzyme \(Y\) at \(37^{\circ} \mathrm{C}\)

Short Answer

Expert verified
The environmental condition that might alter the conformation of an enzyme to the extent that its substrate is unable to bind is in option b (Enzyme B at pH 2).

Step by step solution

01

Grouping Choice Options

It is clear that the options a and d refer to temperature, while the options b and c are about pH levels. So, one needs to determine the effects of both extreme heat and pH on enzymes.
02

Evaluate Temperature Impact

Looking at options a and d, the extreme temperature condition is found in option a (Enzyme A at \(40^{\circ} \mathrm{C}\)). Enzymes generally work best at body temperature which is approximately at \(37^{\circ} \mathrm{C}\). Therefore, the temperature in option d (Enzyme Y at \(37^{\circ} \mathrm{C}\)) is within the optimal range, while the temperature in option a may be too high for some enzymes, possibly leading to their denaturation.
03

Evaluate pH Impact

Looking at options b and c, the extreme pH condition can be seen in option b (Enzyme B at pH 2). While certain enzymes function in a wide range of pH, extreme levels as low as 2 can certainly lead to denaturation. On the other hand, the pH level in option c (Enzyme X at \(pH 4\)) is less extreme than that of option b. Although it might still be too acidic for some enzymes, a pH of 2 is generally more destructive.
04

Concluding the Answer

From the analysis, the most extreme conditions that might alter the conformation of an enzyme to the extent that its substrate is unable to bind are seen in options a and b. As between the two, a pH of 2 is generally more destructive to enzymes than a temperature of \(40^{\circ} \mathrm{C}\).

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Key Concepts

These are the key concepts you need to understand to accurately answer the question.

Enzyme Denaturation
Enzymes are sensitive to environmental conditions, and extreme deviations from their ideal state can lead to enzyme denaturation. Denaturation is a process where the enzyme's structure is altered, causing it to lose its functionality. This can happen due to high temperatures or extreme pH levels. For example, exposing enzymes to heat (like enzyme A at 40°C in the problem) can disrupt hydrogen bonds and other interactions that maintain the enzyme's shape. Without its specific three-dimensional conformation, the enzyme's active site may no longer bind to the substrate effectively, thus inhibiting the enzyme's catalytic activity.

Similarly, acidic conditions (such as enzyme B at pH 2) can protonate or deprotonate amino acid residues in the enzyme, again leading to conformational changes and potential denaturation. These changes can be reversible if the enzyme's environment returns to normal, but irreversible damage may occur in more severe cases. It is important to note that what constitutes 'extreme' conditions varies from enzyme to enzyme—a characteristic illustrated by the particular sensitivities of enzyme A and enzyme B in the exercise.
Optimal pH for Enzymes
Each enzyme has an optimal pH at which it performs its catalytic function most efficiently. pH, a measure of the acidity or basicity of a solution, can profoundly affect an enzyme's conformation and, consequently, its activity. Enzymes like Enzyme X at pH 4 may tolerate slightly acidic environments but have their activity peak within a narrow, more neutral pH range.

For instance, enzymes that function in the stomach, such as pepsin, have an optimal pH around 2, where they are most active in breaking down proteins. Contrarily, enzymes in the blood, like carbonic anhydrase, operate best near neutral pH levels (about pH 7.4). Deviations from an enzyme's optimal pH can cause reduced efficiency or total inactivation. This is why Enzyme B at pH 2 in the exercise could be nearing a state of denaturation, while Enzyme X at pH 4 might still maintain functionality, albeit at reduced efficiency.
Optimal Temperature for Enzymes
Optimal temperature is another critical factor influencing enzyme activity. Like with pH, there is a temperature range within which enzymes exhibit peak activity. Body temperature, roughly 37°C, is generally optimal for many human enzymes, as shown in option d (Enzyme Y at 37°C) from the exercise. However, when the temperature exceeds this optimal range, such as Enzyme A at 40°C, enzymes may begin to denature. Elevated temperatures increase molecular motion, potentially disrupting the intramolecular bonds holding the enzyme in its specific shape.

Conversely, temperatures below the optimal range do not typically denature enzymes but rather slow down their activity. Enzymatic reactions are dependent on molecular collisions, and reduced temperature means fewer collisions per unit time, hence slowed reactions. Understanding the optimal temperature is crucial for harnessing enzymatic reactions in industrial processes and pharmaceuticals, as well as for preserving the functionality of enzymes within living organisms.
Enzyme Conformation
The conformation of an enzyme—a term representing its three-dimensional shape—is essential for its biological function. The specific arrangement of amino acid residues allows the formation of an active site where the substrate molecules bind. Enzyme conformation is maintained by various types of bonds and interactions, including hydrogen bonds, ionic interactions, and hydrophobic packing. If any of these bonds are disrupted, as can happen when exposed to harsh environmental conditions such as high temperature or extremes of pH, the enzyme's shape could change. This conformational change may make it impossible for the enzyme's active site to optimally interact with the substrate, as proposed in the textbook exercise.

It is fascinating how a small area on the enzyme's structure dictates its ability to catalyze reactions, which is why maintaining the integrity of its conformation is pivotal. When discussing enzymes in any context, from academic studies to their application in medical therapies or biotechnology, their conformation should always be one of the foremost considerations.

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Most popular questions from this chapter

The \(k_{\text {cat }}\) for alkaline phosphatase-catalyzed hydrolysis of methylphosphate is approximately \(14 / \sec\) at \(\mathrm{pH} 8\) and \(25^{\circ} \mathrm{C}\). The rate constant for the uncatalyzed hydrolysis of methylphosphate under the same conditions is approximately \(10^{-15} /\) sec. What is the difference in the free energies of activation of these two reactions?

As noted on page \(423,\) a true transition state can bind to an enzyme active site with a \(K_{\mathrm{T}}\) as low as \(7 \times 10^{-26} M .\) This is a remarkable number, with interesting consequences. Consider a hypothetical solution of an enzyme in equilibrium with a ligand that binds with a \(K_{\mathrm{D}}\) of \(10^{-27} M .\) If the concentration of free enzyme, \([\mathrm{E}],\) is equal to the concentration of the enzyme-ligand complex, [EL], what would \([\mathrm{L}],\) the concentration of free ligand, be? Calculate the volume of solution that would hold one molecule of free ligand at this concentration.

Tosyl-L-phenylalanine chloromethyl ketone (TPCK) specifically inhibits chymotrypsin by covalently labeling His \(^{57}\). Tosyl-L-phenylalanine chloromethyl ketone (TPCK) a. Propose a mechanism for the inactivation reaction, indicating the structure of the product(s). b. State why this inhibitor is specific for chymotrypsin. c. Propose a reagent based on the structure of TPCK that might be an effective inhibitor of trypsin.

At \(35^{\circ} \mathrm{C},\) the rate of the reaction catalyzed by enzyme \(\mathrm{A}\) begins to level off. Which hypothesis best explains this observation? a. The temperature is too far below optimum. b. The enzyme has become saturated with substrate. c. Both \(A\) and \(B\). d. Neither A nor B.

In which of the following environmental conditions would digestive enzyme Y be unable to bring its substrate(s) to the transition state? a. At any temperature below optimum b. At any pH where the rate of reaction is not maximum c. At any pH lower than 5.5 d. At any temperature higher than \(37^{\circ} \mathrm{C}\)

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