Problem 1
Find out why the net charge on a protein molecule varies with pH. Identify the amino acids primarily responsible for determining the net charge on a protein molecule and draw simple diagrams to represent the ionisation of their side chains, indicating how you would expect these side chains to be charged at acid, neutral and alkaline \(\mathrm{pH}\) values.
Problem 2
Consider the requirements for sample application in PAGE and IEF. Explain why in PAGE the sample is applied in a discrete narrow band, usually at the cathodic end of the gel, while in IEF the sample can be applied at any point along the length of the gel without concern about location of narrowness of the sample zone.